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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7801386 chr7:64893233 C/G INTS4L1 chr7:64601603-64694600:+ 0.78 5.58 8.68E-7 Box Plot
ACC rs7803570 chr7:72255343 C/A TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs78038613 chr4:141798469 GT/G IL15 chr4:142557752-142655140:+ 0.86 5.19 3.5E-6 Box Plot
ACC rs7804668 chr7:72188483 G/A TYW1B chr7:72023729-72298777:- 1.27 8.83 6.35E-12 Box Plot
ACC rs7806068 chr7:6667965 C/G C7orf70 chr7:6369041-6388590:- 0.71 5.34 2.06E-6 Box Plot
ACC rs7806567 chr7:64465502 G/A INTS4L1 chr7:64601603-64694600:+ 0.71 5.2 3.36E-6 Box Plot
ACC rs7814648 chr8:71603984 A/G XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs7819332 chr8:71668265 G/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs7825446 chr8:71664174 G/A XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs7826483 chr8:71702893 T/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs7830550 chr8:71570431 C/G XKR9 chr8:71581600-71702606:+ 0.63 6.24 8.0E-8 Box Plot
ACC rs7831792 chr8:71565356 A/G XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs78351569 chr8:71608004 G/A XKR9 chr8:71581600-71702606:+ 0.7 6.44 3.85E-8 Box Plot
ACC rs7842851 chr8:71663805 A/G XKR9 chr8:71581600-71702606:+ 0.66 6.35 5.3E-8 Box Plot
ACC rs78533227 chr16:50385789 A/G CYLD chr16:50775961-50835846:+ 0.59 5.38 1.82E-6 Box Plot